{
  "_id": "6a1020bbacfb0bcc41c8bbec",
  "Package": "easylabel",
  "Type": "Package",
  "Title": "Interactive Scatter Plot and Volcano Plot Labels",
  "Version": "0.3.4",
  "Authors@R": "c(person(given = \"Myles\",family = \"Lewis\",\nrole = c(\"aut\", \"cre\"),\nemail = \"myles.lewis@qmul.ac.uk\",\ncomment = c(ORCID = \"0000-0001-9365-5345\")),\nperson(given = \"Katriona\",family = \"Goldmann\",\nrole = c(\"aut\"),\nemail = \"k.goldmann@qmul.ac.uk\",\ncomment = c(ORCID = \"0000-0002-9073-6323\")),\nperson(given = \"Cankut\",family = \"Cubuk\",\nrole = c(\"ctb\"),\nemail = \"c.cubuk@qmul.ac.uk\",\ncomment = c(ORCID = \"0000-0003-4646-0849\")))",
  "Maintainer": "Myles Lewis <myles.lewis@qmul.ac.uk>",
  "BugReports": "https://github.com/myles-lewis/easylabel/issues",
  "URL": "https://github.com/myles-lewis/easylabel",
  "Description": "Interactive labelling of scatter plots, volcano plots and\nManhattan plots using a 'shiny' and 'plotly' interface. Users\ncan hover over points to see where specific points are located\nand click points on/off to easily label them. Labels can be\ndragged around the plot to place them optimally. Plots can be\nexported directly to PDF for publication. For plots with large\nnumbers of points, points can optionally be rasterized as a\nbitmap, while all other elements (axes, text, labels & lines)\nare preserved as vector objects. This can dramatically reduce\nfile size for plots with millions of points such as Manhattan\nplots, and is ideal for publication.",
  "Language": "en-gb",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "biocViews": "",
  "RoxygenNote": "7.3.2",
  "Roxygen": "list(markdown = TRUE)",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libssl-dev\nzlib1g-dev",
  "Repository": "https://myles-lewis.r-universe.dev",
  "Date/Publication": "2025-03-22 14:56:57 UTC",
  "RemoteUrl": "https://github.com/myles-lewis/easylabel",
  "RemoteRef": "HEAD",
  "RemoteSha": "0bf9a889d48d59bb37e206611fc12e169b53de14",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-14 06:08:56 UTC",
    "User": "root"
  },
  "Author": "Myles Lewis [aut, cre] (ORCID: <https://orcid.org/0000-0001-9365-5345>),\nKatriona Goldmann [aut] (ORCID:\n<https://orcid.org/0000-0002-9073-6323>),\nCankut Cubuk [ctb] (ORCID: <https://orcid.org/0000-0003-4646-0849>)",
  "MD5sum": "71fae275ce0a735e1990616ff4ea6663",
  "_user": "myles-lewis",
  "_type": "src",
  "_file": "easylabel_0.3.4.tar.gz",
  "_fileid": "d90c994e82f00236c42acdab1901a96d6602db86cf2ec9dd9018522845a3be50",
  "_filesize": 4349680,
  "_sha256": "d90c994e82f00236c42acdab1901a96d6602db86cf2ec9dd9018522845a3be50",
  "_created": "2026-05-14T06:08:56.000Z",
  "_published": "2026-05-22T09:24:11.486Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77351976376,
      "time": 186,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6988341318"
    },
    {
      "job": 77351976362,
      "time": 278,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6988362577"
    },
    {
      "job": 77351976332,
      "time": 175,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6988331297"
    },
    {
      "job": 77351976459,
      "time": 199,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6988335441"
    },
    {
      "job": 77351975861,
      "time": 224,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6988296451"
    },
    {
      "job": 77351975922,
      "time": 162,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157186651"
    },
    {
      "job": 77351976729,
      "time": 142,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6988329634"
    },
    {
      "job": 77351977214,
      "time": 134,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6988327760"
    },
    {
      "job": 77351976538,
      "time": 136,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6988328047"
    }
  ],
  "_buildurl": "https://github.com/r-universe/myles-lewis/actions/runs/25844753970",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/myles-lewis/easylabel",
  "_commit": {
    "id": "0bf9a889d48d59bb37e206611fc12e169b53de14",
    "author": "Myles Lewis <myles.lewis@qmul.ac.uk>",
    "committer": "Myles Lewis <myles.lewis@qmul.ac.uk>",
    "message": "Update version, NEWS\n",
    "time": 1742655417
  },
  "_maintainer": {
    "name": "Myles Lewis",
    "email": "myles.lewis@qmul.ac.uk",
    "login": "myles-lewis",
    "uuid": 24961656,
    "orcid": "0000-0001-9365-5345"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    },
    {
      "package": "DT",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "gtools",
      "role": "Imports"
    },
    {
      "package": "memoise",
      "role": "Imports"
    },
    {
      "package": "plotly",
      "version": ">= 4.10.0",
      "role": "Imports"
    },
    {
      "package": "RColorBrewer",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "role": "Imports"
    },
    {
      "package": "shinycssloaders",
      "role": "Imports"
    },
    {
      "package": "shinybusy",
      "role": "Imports"
    },
    {
      "package": "AnnotationDbi",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "magick",
      "role": "Suggests"
    },
    {
      "package": "org.Hs.eg.db",
      "role": "Suggests"
    },
    {
      "package": "qvalue",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "myles-lewis",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 8,
  "_contributors": [
    {
      "user": "myles-lewis",
      "count": 341,
      "uuid": 24961656
    },
    {
      "user": "cankutcubuk",
      "count": 7,
      "uuid": 17905535
    }
  ],
  "_userbio": {
    "uuid": 24961656,
    "type": "user",
    "name": "Myles Lewis"
  },
  "_downloads": {
    "count": 297,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/easylabel"
  },
  "_devurl": "https://github.com/myles-lewis/easylabel",
  "_searchresults": 13,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/easylabel.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/myles-lewis/easylabel",
  "_realowner": "myles-lewis",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2021-10-05"
    },
    {
      "version": "0.2.2",
      "date": "2021-10-23"
    },
    {
      "version": "0.2.4",
      "date": "2021-11-15"
    },
    {
      "version": "0.2.7",
      "date": "2023-10-24"
    },
    {
      "version": "0.2.8",
      "date": "2024-03-08"
    },
    {
      "version": "0.3.2",
      "date": "2025-01-09"
    },
    {
      "version": "0.3.3",
      "date": "2025-02-06"
    }
  ],
  "_exports": [
    "add_labels",
    "arial",
    "easylabel",
    "easyManhattan",
    "easyMAplot",
    "easyVolcano",
    "gg_qqplot",
    "loadlabel",
    "qqplot",
    "qqplot2"
  ],
  "_datasets": [
    {
      "name": "volc1",
      "title": "Example volcano data for vignette",
      "object": "volc1",
      "class": [
        "data.frame"
      ],
      "fields": [
        "baseMean",
        "log2FoldChange",
        "lfcSE",
        "stat",
        "pvalue",
        "padj"
      ],
      "rows": 6,
      "table": true,
      "tojson": true
    },
    {
      "name": "volc2",
      "title": "Example volcano data for vignette",
      "object": "volc2",
      "class": [
        "data.frame"
      ],
      "fields": [
        "logFC",
        "AveExpr",
        "t",
        "P.Value",
        "adj.P.Val",
        "B"
      ],
      "rows": 6,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "add_labels",
      "title": "Add labels to a plotly scatter plot",
      "topics": [
        "add_labels"
      ]
    },
    {
      "page": "arial",
      "title": "Change plotly font to Arial",
      "topics": [
        "arial"
      ]
    },
    {
      "page": "easylabel",
      "title": "Interactive scatter plot labels",
      "topics": [
        "easylabel"
      ]
    },
    {
      "page": "easyManhattan",
      "title": "Interactive Manhattan plot labels",
      "topics": [
        "easyManhattan"
      ]
    },
    {
      "page": "easyMAplot",
      "title": "Interactive MA plot labels",
      "topics": [
        "easyMAplot"
      ]
    },
    {
      "page": "easyVolcano",
      "title": "Interactive volcano plot labels",
      "topics": [
        "easyVolcano"
      ]
    },
    {
      "page": "gg_qqplot",
      "title": "Log QQ p-value plot (ggplot2)",
      "topics": [
        "gg_qqplot"
      ]
    },
    {
      "page": "loadlabel",
      "title": "Load easylabel saved state",
      "topics": [
        "loadlabel"
      ]
    },
    {
      "page": "qqplot",
      "title": "Log QQ p-value plot",
      "topics": [
        "qqplot"
      ]
    },
    {
      "page": "qqplot2",
      "title": "Log QQ p-value plot (2nd stage)",
      "topics": [
        "qqplot2"
      ]
    },
    {
      "page": "summary.easylab",
      "title": "Summarise easylabel saved state object",
      "topics": [
        "summary.easylab"
      ]
    },
    {
      "page": "volc1",
      "title": "Example volcano data for vignette",
      "topics": [
        "volc1"
      ]
    },
    {
      "page": "volc2",
      "title": "Example volcano data for vignette",
      "topics": [
        "volc2"
      ]
    }
  ],
  "_readme": "https://github.com/myles-lewis/easylabel/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "base64enc",
    "bslib",
    "cachem",
    "cli",
    "commonmark",
    "cpp11",
    "crosstalk",
    "curl",
    "data.table",
    "digest",
    "dplyr",
    "DT",
    "evaluate",
    "farver",
    "fastmap",
    "fontawesome",
    "fs",
    "generics",
    "ggplot2",
    "glue",
    "gtable",
    "gtools",
    "highr",
    "htmltools",
    "htmlwidgets",
    "httpuv",
    "httr",
    "isoband",
    "jquerylib",
    "jsonlite",
    "knitr",
    "labeling",
    "later",
    "lazyeval",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "openssl",
    "otel",
    "pillar",
    "pkgconfig",
    "plotly",
    "promises",
    "purrr",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "rmarkdown",
    "S7",
    "sass",
    "scales",
    "shiny",
    "shinybusy",
    "shinycssloaders",
    "sourcetools",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "tinytex",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr",
    "xfun",
    "xtable",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "easylabel.Rmd",
      "filename": "easylabel.html",
      "title": "easylabel",
      "author": "Myles Lewis, Katriona Goldmann",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Installation",
        "Scatter plots",
        "Export plot to PDF",
        "Save state",
        "Export SVG from plotly",
        "Export as plotly object",
        "Colour",
        "Shape",
        "Size",
        "Choosing label names",
        "Controlling axes",
        "Axis titles",
        "Axis limits and outliers",
        "Axis tick marks",
        "Gridlines",
        "Legends",
        "Further control of plotting",
        "panel.last",
        "plotly_filter",
        "Volcano plots",
        "MA plots",
        "Expanding full gene names",
        "Colour schemes",
        "Titles",
        "Adding left/right subtitles",
        "Setting P value cut-off",
        "Complex colour schemes",
        "Controlling labels",
        "Label line and text",
        "Adding label boxes",
        "Matching label & point colours",
        "Manhattan plot",
        "Locus plots",
        "Known issues"
      ],
      "created": "2021-09-21 21:41:23",
      "modified": "2025-01-07 07:47:55",
      "commits": 47
    }
  ],
  "_score": 4.7160033436347994,
  "_indexed": true,
  "_nocasepkg": "easylabel",
  "_universes": [
    "myles-lewis"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.3.4",
      "date": "2026-05-14T06:11:48.000Z",
      "distro": "noble",
      "commit": "0bf9a889d48d59bb37e206611fc12e169b53de14",
      "fileid": "ac364b3c9cbe1891f16e81cc5f8ad0c6b409663c188914d3125ef262e67eb7b5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/myles-lewis/actions/runs/25844753970"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.3.4",
      "date": "2026-05-14T06:13:22.000Z",
      "distro": "noble",
      "commit": "0bf9a889d48d59bb37e206611fc12e169b53de14",
      "fileid": "c50aed99b8224cb17e0c46ae35ecfa4fc0a3d0f863048a59ff0e95cbc569a177",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/myles-lewis/actions/runs/25844753970"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.3.4",
      "date": "2026-05-14T06:11:21.000Z",
      "commit": "0bf9a889d48d59bb37e206611fc12e169b53de14",
      "fileid": "9a54fd21a34186b900af33dde0ac7405dd06b7ed5308ed140980055e3892167a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/myles-lewis/actions/runs/25844753970"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.3.4",
      "date": "2026-05-14T06:11:25.000Z",
      "commit": "0bf9a889d48d59bb37e206611fc12e169b53de14",
      "fileid": "225f36b5452d1e27933af3a4587c80838c6041ab1485ed6bad80b98bd6d9742d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/myles-lewis/actions/runs/25844753970"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.3.4",
      "date": "2026-05-14T06:10:55.000Z",
      "commit": "0bf9a889d48d59bb37e206611fc12e169b53de14",
      "fileid": "c519e27c9850004f82b23b27ac9078f49da34868548419073b75556b11c8bcb5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/myles-lewis/actions/runs/25844753970"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.3.4",
      "date": "2026-05-14T06:10:41.000Z",
      "commit": "0bf9a889d48d59bb37e206611fc12e169b53de14",
      "fileid": "3c57707e8961d469e629f268d1df3d4fe23a5a9753219ed3fd26c616a868fdd0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/myles-lewis/actions/runs/25844753970"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.3.4",
      "date": "2026-05-14T06:10:46.000Z",
      "commit": "0bf9a889d48d59bb37e206611fc12e169b53de14",
      "fileid": "8d4b3e5d3711322bef0cae1399bd7911a5b137d9d1d07cde017b42a04fb14834",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/myles-lewis/actions/runs/25844753970"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.3.4",
      "date": "2026-05-22T09:23:52.000Z",
      "commit": "0bf9a889d48d59bb37e206611fc12e169b53de14",
      "fileid": "3e378ed4234352880faf87f68c24becc741213b24636190f1bbfd5939f31fc60",
      "status": "success",
      "buildurl": "https://github.com/r-universe/myles-lewis/actions/runs/25844753970"
    }
  ]
}