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  "Title": "Gene Locus Plot with Gene Annotations",
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  "Repository": "https://myles-lewis.r-universe.dev",
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    "locus_ggplot",
    "locus_plot",
    "locus_plotly",
    "multi_layout",
    "overlay_plot",
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    "scatter_plot",
    "scatter_plotly",
    "set_layers"
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      "title": "SLE GWAS data subset",
      "object": "SLE_gwas_sub",
      "file": "SLE_gwas_sub.rdata",
      "class": [
        "data.frame"
      ],
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        "chrom",
        "pos",
        "rsid",
        "other_allele",
        "effect_allele",
        "p",
        "beta",
        "se",
        "OR",
        "OR_lower",
        "OR_upper",
        "r2"
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      "tojson": true
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    {
      "page": "eqtl_plot",
      "title": "Locus eQTL plot",
      "topics": [
        "eqtl_plot"
      ]
    },
    {
      "page": "genetrack_ly",
      "title": "Gene tracks using 'plotly'",
      "topics": [
        "genetrack_ly"
      ]
    },
    {
      "page": "genetracks",
      "title": "Plot gene tracks",
      "topics": [
        "genetracks"
      ]
    },
    {
      "page": "genetracks_grob",
      "title": "Create gene tracks grob",
      "topics": [
        "genetracks_grob"
      ]
    },
    {
      "page": "gg_addgenes",
      "title": "Add gene tracks to a ggplot2 plot",
      "topics": [
        "gg_addgenes"
      ]
    },
    {
      "page": "gg_genetracks",
      "title": "Plot gene tracks",
      "topics": [
        "gg_genetracks"
      ]
    },
    {
      "page": "gg_scatter",
      "title": "Locus scatter plot using ggplot2",
      "topics": [
        "gg_scatter"
      ]
    },
    {
      "page": "line_plot",
      "title": "Locus line plot",
      "topics": [
        "line_plot"
      ]
    },
    {
      "page": "link_eqtl",
      "title": "Obtain GTEx eQTL data via LDlinkR",
      "topics": [
        "link_eqtl"
      ]
    },
    {
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      "title": "Obtain LD at a locus from LDlink",
      "topics": [
        "link_LD"
      ]
    },
    {
      "page": "link_recomb",
      "title": "Query UCSC for Recombination data",
      "topics": [
        "link_recomb"
      ]
    },
    {
      "page": "locus",
      "title": "Create locus object for plotting",
      "topics": [
        "locus"
      ]
    },
    {
      "page": "locus_ggplot",
      "title": "Locus plot using ggplot2",
      "topics": [
        "locus_ggplot"
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    {
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        "locus_plot"
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    {
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        "locus_plotly"
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