Introduction | Installation | Scatter plots | Export plot to PDF | Save state | Export SVG from plotly | Export as plotly object | Colour | Shape | Size | Choosing label names | Controlling axes | Axis titles | Axis limits and outliers | Axis tick marks | Gridlines | Legends | Further control of plotting | panel.last | plotly_filter | Volcano plots | MA plots | Expanding full gene names | Colour schemes | Titles | Adding left/right subtitles | Setting P value cut-off | Complex colour schemes | Controlling labels | Label line and text | Adding label boxes | Matching label & point colours | Manhattan plot | Locus plots | Known issues
Package: easylabel 0.3.4
easylabel: Interactive Scatter Plot and Volcano Plot Labels
Interactive labelling of scatter plots, volcano plots and Manhattan plots using a 'shiny' and 'plotly' interface. Users can hover over points to see where specific points are located and click points on/off to easily label them. Labels can be dragged around the plot to place them optimally. Plots can be exported directly to PDF for publication. For plots with large numbers of points, points can optionally be rasterized as a bitmap, while all other elements (axes, text, labels & lines) are preserved as vector objects. This can dramatically reduce file size for plots with millions of points such as Manhattan plots, and is ideal for publication.
Authors:
easylabel_0.3.4.tar.gz
easylabel_0.3.4.zip(r-4.7)easylabel_0.3.4.zip(r-4.6)easylabel_0.3.4.zip(r-4.5)
easylabel_0.3.4.tgz(r-4.6-any)easylabel_0.3.4.tgz(r-4.5-any)
easylabel_0.3.4.tar.gz(r-4.7-any)easylabel_0.3.4.tar.gz(r-4.6-any)
easylabel_0.3.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
easylabel/json (API)
| # Install 'easylabel' in R: |
| install.packages('easylabel', repos = c('https://myles-lewis.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/myles-lewis/easylabel/issues
Last updated from:0bf9a889d4. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 226 | ||
| source / vignettes | OK | 264 | ||
| linux-release-x86_64 | OK | 202 | ||
| macos-release-arm64 | OK | 166 | ||
| macos-oldrel-arm64 | OK | 106 | ||
| windows-devel | OK | 122 | ||
| windows-release | OK | 149 | ||
| windows-oldrel | OK | 157 | ||
| wasm-release | OK | 150 |
Exports:add_labelsarialeasylabeleasyManhattaneasyMAploteasyVolcanogg_qqplotloadlabelqqplotqqplot2
Dependencies:askpassbase64encbslibcachemclicommonmarkcpp11crosstalkcurldata.tabledigestdplyrDTevaluatefarverfastmapfontawesomefsgenericsggplot2gluegtablegtoolshighrhtmltoolshtmlwidgetshttpuvhttrisobandjquerylibjsonliteknitrlabelinglaterlazyevallifecyclemagrittrmemoisemimeopensslotelpillarpkgconfigplotlypromisespurrrR6rappdirsRColorBrewerRcpprlangrmarkdownS7sassscalesshinyshinybusyshinycssloaderssourcetoolsstringistringrsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunxtableyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Add labels to a plotly scatter plot | add_labels |
| Change plotly font to Arial | arial |
| Interactive scatter plot labels | easylabel |
| Interactive Manhattan plot labels | easyManhattan |
| Interactive MA plot labels | easyMAplot |
| Interactive volcano plot labels | easyVolcano |
| Log QQ p-value plot (ggplot2) | gg_qqplot |
| Load easylabel saved state | loadlabel |
| Log QQ p-value plot | qqplot |
| Log QQ p-value plot (2nd stage) | qqplot2 |
| Summarise easylabel saved state object | summary.easylab |
| Example volcano data for vignette | volc1 |
| Example volcano data for vignette | volc2 |
